Biochemical Soul Musings on Nature, Science, Evolution, Biology, and Education


Top 6 Search Engine Queries Leading Here

In the past month... (top 6 in entertainment value)

"im a man in panties"
"Sarah Palin is a idoit"
"end of human race dna replication"
"truckpulling black widow"
"preparing for world war iii"
"i'm not even sure we exist same level of consciousness"

I have no idea how most of those came to me.



Don’t Fear the Creatures

Me manly. Throw baby.

Me manly. Throw baby.

I fear nothing.

No, that is not statement of my own masculine machismo, which I generally lack. In fact, if you were to stick a fuzzy kitten or a baby before me, you would find me near-instantly reduced to fawning and cooing like a 5-year old girl. I’m not ashamed of that.

No, what I mean is that, for whatever reason – be it upbringing or genetics – I seem to lack a trait that in my experience 95% of the general public harbors. That trait is an irrational fear of some aspect of the living world.

Here is one example of this. I have talked to literally hundreds of people about this over the course of my thirty years, and without fail, nearly everyone I have ever spoken to reveal some sort of prejudicial bias against some specific branch of the animal kingdom. Usually it either is bugs in general, spiders, or snakes. For others it is raccoons, or opossoms, or rats, or any “pesky” vermin.

Often, instead of verbalizing it as fear, they will say “oh, I hate them,” or “I really don’t like them.” However, it all seems to break down to the same thing: an irrational distaste for entire groups of living creatures.

"I hate you too."

"I hate you too."

I simply cannot understand it. I mean, yes I understand intense phobias. My wife is a psychologist and I have a firm grasp on the nature of phobias. But the prevalence of this hatred and fear seems to go far beyond a massive case of societal phobia.

Considering that I seem to be alone in this (though in view of the subject of this blog in general, I’m sure many of you readers are like me), it seems to me that the main question I have is not “why do they fear?” but “why do I not fear?”

I was raised as a redneck rat-tailed child in the woods in Northeast Texas and then in the Ozark Mountains of Northwest Arkansas. I grew up surrounded with snakes, spiders, scorpions, and all manner of wildlife. But the rub of it is this: so did everyone else I ever grew up around! So did my parents, my siblings, and my friends. Yet still, all of them have some major irrational bias or another against one or more of these creatures.

So why is it you can throw a timber rattlesnake 3 feet in front of me and I’ll be like “wow! cool!”, whereas most people will scream and cry? My entire property is overrun with Northern Black Widows (see pics and video here), yet I have never had the faintest urge to call an exterminator.

I think at this point I should quickly define fear. If you stuck the same snake within striking distance of my body, you can be damn sure that fight-or-flight would kick in and I’d retreat in haste. I wouldn’t dare handle a black widow. The fight-or-flight is reflex to avoid bodily harm. The rest is rational fear, or more accurately, simple respect. This is not the fear I am talking about. I’m referring to the guttural yuk, eww, or aghhh factor that so many harbor.

So tell me, dear reader, because I honestly would like to understand – why do you fear/hate/dislike whatever part of the animal world you do?

I have thought about this a lot, and my best hypothesis is that, for me, fascination trumps fear, and even kills it. I have had an insanely passionate fascination in all things biology (and science in general) since I was 5 (as far back as I can remember). When I was young, I dissected dead things, I played with insects, and I handled king snakes. Some of my little friends did this, but even then, I remember that I seemed much more interested by those things than my friends did. So is this the simple answer? Maybe, but I’m not so sure.

If so, the question just shifts a degree to “why the hell doesn’t everyone else find the living world as fascinating as I do?”

"Be glad glass is too smooth. Be very very glad."

"Be glad glass is too smooth. Be very very glad."

I had several traumatic animal-related events as a child. When I was 9, a scorpion found its way into my pajamas while I slept. It got wedged against my calf where it stung me 8 times. My dad ran in, ripped my pants down, and stomped the scorpion that fell to the ground, while I screamed bloody murder. Still, I think scorpions are awesome. A giant black rat snake I once handled grabbed my hand and chewed it until the blood flowed (also see my related post on black rat snakes and ignorant rednecks). I’ve been stung by countless hymenoptera (hornets bees, wasps, yellow jackets). I’ve been bitten by spiders. Still, I love them all.

Is my brain simply not wired to make the kind of phobic connections that so many others have? My wife is deathly afraid of cockroaches, yet I’m sure the worst that ever happened was that she got one in her hair. Somehow I doubt that a difference in my own susceptibility to phobias or conditioning is the answer – I can’t imagine I wouldn’t develop PTSD if a truly traumatic event were to occur to me.

Am I more rational? I know that in many cases I’m much more rational than others, though I still have my own irrational quirks. However, my lack of fear also extends to other things – like death. I have thought and thought and I can honestly say there is nothing that I simply fear. There are many things that I’d rather not happen, but none that I chronically fear.

I don’t mean this to come across as arrogant at all. I have many many faults, most of which I can admit. But this seems to be a trait of mine I have observed. Those that know me – tell me if you disagree.

It just doesn’t make any sense to me to dislike, hate, or fear any type of creature. There is nothing logical about it. To me it’s like saying “I don’t like the color green.” What does that even mean? I can understand not wanting to wear green because one finds it less aesthetically pleasing or because it doesn't match one's eyes. But this is fundamentally different from not liking the color itself. I would be scared to tromp through a grizzly den, but I don’t hate or fear grizzlies in general.

Anyway, I’ve rambled enough on this. I would very much like to hear any thoughts any of you have.


Biological Databases and the Logos I Designed

I recently designed a couple of logos for Dr. J. Christopher Ellis to adorn his biological database website. I thought I'd throw him a link as well as showcase the two logos I made.

The first is for the frontpage of his site I made this using the 3D animation software, Maya 7, and Flash. Note: if you click on the logo, there are three possible animations that will occur. I know next to nothing about flash animation, but I managed to get it so that it picks one of the three events at random. As such, you may have to click several times to see all three. Yes - they are completely pointless - but I wanted to learn at least a little ActionScript. The pixelation is due to resizing to fit into this blog.

I also designed the following logo for his snoRNP database. For those of you not in the know, snoRNP stands for "small nucleolar ribonucleoprotein", which bind to snoRNAs, or "small nucleolar ribonucleic acids". Together they are involved in modifying rRNAs, or "ribosomal ribonucleic acids", which are themselves part of the structure and function of the ribosome (your protein making machines).

So for those of you involved in snoRNA research, you may find his database useful. He also has a couple of applets for finding motifs within UTRs (untranslated regions). FYI: the sites are still in early construction.

The snoRNP Database


Giant Animal Smasher to Search for the Elusive “Darwin Particle”

High-energy squirrels about to release the "Darwin Particle"

Thanks to PZ Myers at Pharyngula for finding this one.  I post it here for the simple fact that this is side-splittingly hilarious! Go get your giggles on.


Malwin dismissed critics who claimed that smashing animals together at high speeds was cruel to the animals. He said, "The animals won't be feeling anything. The collision will vaporize the squirrels in a fraction of a second.  Their brains won't be able to transmit pain at those speeds, so it'll be painless for them."

Scientists currently rely on computer simulations to smash biological units, but simulations can only do so much, and without the visceral enjoyment of seeing two squirrels collide at thousands of miles an hour.


Random Thought of the Day

When you work in a building with lots of blind corners, where people routinely carry noxious chemicals, toxins, carcinogens, animals, and microorganisms through the hallways, it is probably best not to run full speed while watching the geese outside the window.

I'm not talking about myself.